BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A06SP1|AL425962
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig776 1707 0.0
>3x_Contig776
Length = 3521
Score = 1707 bits (859), Expect = 0.0
Identities = 864/867 (99%)
Strand = Plus / Plus
Query: 4 gaatcaattgactgtattggacaccgcttctttcggttctttggaagaggttgacaccat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaatcaattgactgtattggacaccgcttctttcggttctttggaagaggttgacaccat 348
Query: 64 cagtttcgttactttaccagctgtttccaatattatcactaagttgacttctgctaagca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cagtttcgttactttaccagctgtttccaatattatcactaagttgacttctgctaagca 408
Query: 124 aattaccattgctgacactgctttggaatctatcgctggtttcgaagatttagacgaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aattaccattgctgacactgctttggaatctatcgctggtttcgaagatttagacgaaat 468
Query: 184 tgaagtcttcaatgtcaacaacaacaaaggtttagcttccattgactctaagttgaagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgaagtcttcaatgtcaacaacaacaaaggtttagcttccattgactctaagttgaagca 528
Query: 244 cgtgaagactgcyttggaaattactttcaacggacaatctgctgaaatctctttcgacga 303
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cgtgaagactgctttggaaattactttcaacggacaatctgctgaaatctctttcgacga 588
Query: 304 attagaatgggctaacaacatcactttgagagatgtttccagtgcttctttcgctaagtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 attagaatgggctaacaacatcactttgagagatgtttccagtgcttctttcgctaagtt 648
Query: 364 gagtaacgttaacgcttccctaggtttcattaacaactccttgccatctattgacttgtc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gagtaacgttaacgcttccctaggtttcattaacaactccttgccatctattgacttgtc 708
Query: 424 caccttggaaaagattggtggttctttgtccattgtctccaacgaagaattgaccgagtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 caccttggaaaagattggtggttctttgtccattgtctccaacgaagaattgaccgagtt 768
Query: 484 ggacttctctaacttaacctctgttggtggtggtttcgttatcgctaacaactcaaagtt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ggacttctctaacttaacctctgttggtggtggtttcgttatcgctaacaactcaaagtt 828
Query: 544 ggctaccattgacaccttctctgaattgtctacyattggtggtgctttggtcgttaccgg 603
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 829 ggctaccattgacaccttctctgaattgtctactattggtggtgctttggtcgttaccgg 888
Query: 604 taagttcggtgatttggaattcccaagtttgaagtctgttaagggtggtgctgatatcga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 taagttcggtgatttggaattcccaagtttgaagtctgttaagggtggtgctgatatcga 948
Query: 664 atctactgcaagcaacttctcttgcgatgctttgaacaagttgcaacaaaagggtggtat 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 atctactgcaagcaacttctcttgcgatgctttgaacaagttgcaacaaaagggtggtat 1008
Query: 724 ccaaggtgactctttcgtctgttaggatggtcaaacttctacctccgtcaaattgactgc 783
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1009 ccaaggtgactctttcgtctgtaaggatggtcaaacttctacctccgtcaaattgactgc 1068
Query: 784 taccggtacctccgatgatgatgatagcactgctacatccgactctggaagcgcaggttc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 taccggtacctccgatgatgatgatagcactgctacatccgactctggaagcgcaggttc 1128
Query: 844 ttccaccaccagttcttccaagtcttc 870
|||||||||||||||||||||||||||
Sbjct: 1129 ttccaccaccagttcttccaagtcttc 1155
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7608
Number of Sequences: 1807
Number of extensions: 7608
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)